Browsing by Author "Borrego, MJ"
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- Chlamydia Trachomatis: When the Virulence-Associated Genome Backbone Imports a Prevalence-Associated Major Antigen SignaturePublication . Borges, V; Cordeiro, D; Salas, AI; Lodhia, Z; Correia, C; Isidro, J; Fernandes, C; Rodrigues, AM; Azevedo, J; Alves, J; Roxo, J; Rocha, M; Côrte-Real, R; Vieira, L; Borrego, MJ; Gomes, JPChlamydia trachomatis is the most prevalent sexually transmitted bacterium worldwide and the causative agent of trachoma. Its strains are classified according to their ompA genotypes, which are strongly linked to differential tissue tropism and disease outcomes [ocular disease, urogenital disease and lymphogranuloma venereum (LGV)]. While the genome-based species phylogenetic tree presents four main clades correlating with tropism/prevalence, namely ocular, LGV, urogenital T1 (more prevalent genotypes) and urogenital T2 (less prevalent genotypes), inter-clade exchange of ompA is considered a rare phenomenon probably mediating marked tropism alterations. An LGV epidemic, associated with the clonal expansion of the L2b genotype, has emerged in the last few decades, raising concerns particularly due to its atypical clinical presentation (ulcerative proctitis) and circulation among men who have sex with men (MSM). Here, we report an LGV outbreak, mostly affecting human immunodeficiency virus-positive MSM engaging in high-risk sexual practices, caused by an L2b strain with a rather unique non-LGV ompA signature that precluded the laboratory notification of this outbreak as LGV. C. trachomatis whole-genome capture and sequencing directly from clinical samples was applied to deeply characterize the genomic backbone of this novel LGV outbreak-causing clone. It revealed a chimeric genome structure due to the genetic transfer of ompA and four neighbouring genes from a serovar D/Da strain, likely possessing the genomic backbone associated with the more prevalent urogenital genotypes (T1 clade), to an LGV (L2b) strain. The hybrid L2b/D-Da strain presents the adhesin and immunodominant antigen MOMP (major outer membrane protein) (encoded by ompA) with an epitope repertoire typical of non-invasive genital strains, while keeping the genome-dispersed virulence fingerprint of a classical LGV strain. As previously reported for inter-clade ompA exchange among non-LGV clades, this novel C. trachomatis genomic mosaic involving a contemporary epidemiologically and clinically relevant LGV strain may have implications on its transmission, tissue tropism and pathogenic capabilities. The emergence of variants with epidemic and pathogenic potential highlights the need for more focused surveillance strategies to capture C. trachomatis evolution in action.
- Lymphogranuloma Venereum: a Retrospective Analysis of an Emerging Sexually Transmitted Disease in a Lisbon Tertiary CenterPublication . Neves, JM; Ramos Pinheiro, R; Côrte‐Real, R; Borrego, MJ; Rodrigues, A; Fernandes, CBackground: Lymphogranuloma venereum (LGV) is a sexual transmitted infection (STI), currently endemic within the population of men who have sex with men (MSM) of Western Countries. L2B variant has been reported as the predominant strain in the current LGV epidemics, although a shift towards L2-434 has been observed in some European countries. Objectives: To evaluate and characterize the population with LGV infection diagnosed in Centro Hospitalar Universitário de Lisboa Central, Lisbon, Portugal. Methods: A retrospective analysis of all LGV diagnoses between 2016 and 2019 was performed. The diagnosis was established through ompA-genotyping of samples yielding a positive result to Chlamydia trachomatis (CT). All considered samples were retrieved from the clinician activity, through swabbing and urine analysis and CT infection diagnosis was obtained using real-time PCR. Results: During the period studied 16 279 CT diagnostics tests were employed, with a striking increase from 2016 (n = 467) to 2019 (n = 9362). A total of 1602 diagnoses of CT were established, from which 168 (10.5%) corresponded to LGV, with both infections showing a rising evolution, between 2016 and 2019, of 2.9 and 2.7 times, respectively. The majority of the LGV strains were genotyped as L2/434 (67.3%; n = 113). LGV predominantly affected MSM and men who have sex with men and women (97.0%; n = 163). Anorectal infection was the most prevalent one (90.5%; n = 152), being proctitis the main clinical presentation (76.2%; n = 128). Absence of symptoms was reported in almost 15% of the cases (n = 24). The presence of concomitant infection with human immunodeficiency virus was dominant (73.2%; n = 123) and the prevalence of one or more STI co-infections was about 60.1% (n = 99). Conclusions: An increasing evolution of CT and LGV testing and diagnosing was observable throughout the studied period. Characteristics of the population are similar with those described within LGV epidemics. In accordance with recent European studies, predominance towards L2 genotype was identified.
- Outbreak of Monkeypox in an STD Clinic in LisbonPublication . Caldeira, M; Fernandes, C; Neves, J; João, A; Calado, R; Pinto, AR; Borrego, MJ; Cordeiro, R; Machado, J; Pelerito, A; Lopes de Carvalho, I; Vieira, L; Núncio, MS; Paiva Lopes, MJ
- Recomendações para o Diagnóstico e Tratamento da Infeção Não Complicada por Chlamydia trachomatis (Não- Linfogranuloma Venéreo) em PortugalPublication . Andrade, P; Azevedo, J; Lisboa, C; Fernandes, C; Borrego, MJ; Borges-Costa, J; Reis, J; Santiago, F; Santos, A; Alves, JChlamydia trachomatis infection is the most prevalent sexually transmitted bacterial infection in the world. Being associated with a large number of asymptomatic carriers, the diagnosis is frequently challenging and requires appropriate laboratory testing. In Portugal, the incidence of the disease has been consistently increasing in recent years, meaning that special awareness is required for case identification, contact tracing and application of appropriate treatments. These recommendations result from the adaptation of the international consensuses on the diagnosis and treatment of Chlamydia trachomatis infection to the Portuguese healthcare setting, with the aim of standardizing the clinical and laboratory approach to symptomatic and nonsymptomatic carriers of the disease.
- Resistência aos Antibióticos em Neisseria Gonorrhoeae - Passado, Presente e FuturoPublication . Tavares, E; Fernandes, C; Borrego, MJ; Rodrigues, A; Cardoso, JIntrodução: A resistência aos antibióticos em Neisseria gonorrhoeae tem-se revelado um importante problema de saúde pública mundial, estando a levantar grandes dificuldades em termos de opções terapêuticas em alguns países. Objectivo: Rever o panorama (nacional e internacional) da resistência aos antibióticos em Neisseria gonorrhoeae. Material e Métodos: Pesquisa de artigos em revistas nacionais e internacionais (estas últimas com indexação na Pubmed/Medline e redigidas em inglês). Utilizaram-se como palavras chave: “Neisseria gonorrhoeae antibiotic resistance”. Resultados: As cefalosporinas de terceira geração (ceftriaxone e cefixima), associadas ou não à azitromicina, substituíram as fluoroquinolonas como fármacos de primeira linha no tratamento da gonorreia. Os relatos de resistência às cefalosporinas são ainda relativamente escassos; contudo, o aumento da concentração inibitória mínima (CIM), traduzido pela diminuição da sensibilidade a esta classe de antibióticos, tem vindo a ser regularmente descrita. Por outro lado, a resistência à azitromicina foi relatada em vários países. Em Portugal, já foram reportados casos de Neisseria gonorrhoeae resistentes à azitromicina mas não às cefalosporinas. Porém, estirpes com diminuição da sensibilidade às cefalosporinas foram já detetadas. Conclusão: Novas alternativas terapêuticas são indispensáveis para o tratamento das infeções por Neisseria gonorrhoeae, bem como condutas adequadas por parte dos médicos e dos doentes e seus contactantes.